| My Father Bleeds History | | 1986 | Other |
| And Here My Troubles Began | | 1991 | Trade Paperback |
 | Maus | | 1991 | |
| Maus I & II | | 1991 | Trade Paperback |
 | David Boring #19-21 | Vol. 1 #19-21 | 2000 | Trade Paperback |
 | Persepolis The Story of a Childhood | | 2003 | Softcover |
 | Jimmy Corrigan: The Smartest Kid on Earth | | 2003-04-29 | Trade Paperback |
 | Ice Haven #22 | Vol. 1 #22 | 2005-06 | Hardcover |
 | The Acme Novelty Library | | 2005-09 | Hardcover |
 | Black Hole #1-12 | Vol. 1 #1-12 | 2005-10-18 | Hardcover |
 | Good-bye, Chunky Rice | | 2006 | Softcover |
 | La Perdida | Vol. 1-5 | 2006 | Hardcover |
 | Alias the Cat! | | 2007 | Hardcover |
 | My Brain Is Hanging Upside Down | | 2008 | Hardcover |
 | Black Hole #1-12 | Vol. 1 #1-12 | 2008-01-08 | Trade Paperback |
 | A.D.: New Orleans After the Deluge | | 2009 | Hardcover |
 | Asterios Polyp | | 2009-07 | Hardcover |
 | X'ed Out | Vol. 1 | 2010 | Hardcover |
 | X'ed Out | | 2010 | Hardcover |
 | Bodyworld | | 2010-04 | Hardcover |
 | MetaMaus | | 2011 | Hardcover |
 | The Complete Maus | | 2011 | Hardcover |
 | Mister Wonderful: A Love Story | | 2011-04 | Hardcover |
| Habibi | | 2011-09-20 | |
 | The Hive | Vol. 2 | 2012 | Hardcover |
 | Here | | 2014 | Hardcover |
 | Sugar Skull | Vol. 3 | 2014 | Hardcover |
 | The Thrilling Adventures of Lovelace and Babbage: The (Mostly) True Story of the First Computer | | 2015 | Hardcover |
 | Imagine Wanting Only This | | 2017 | Hardcover |
 | Qualification: A Graphic Memoir in Twelve Steps | | 2019 | Hardcover |
 | Rusty Brown #1 | #1 | 2019 | Hardcover |
 | The Adventures of Alexander Von Humboldt | | 2019 | Hardcover |